Sudeepto Saha


Currently pursuing Bachelor in Biochemistry and Biotechnology at Independent University, Bangladesh. My research interest is in Genetics & Genomics, Computational Biology, Plant Bioinformatics and Astronomy & Astrobiology. I am a Research Assistant(RA) in the Astronomy Research Group, IUB, engaged in the project " Modeling the direction-dependent systematic effects of the LOFAR telescope." under the supervision of Khan Muhammad Bin Asad, PhD


Programming Languages:Python, R

Bioinformatics Tools:BLAST, MEGAX, Primer 3, Expassy, Sequence Manipulation Site, TMHMM, IDT, String, Interpro and Phyre

Laboratory Skills:Polymerase Chain Reaction, DNA Gel Electrophoresis, ELISA, Leishman Staining, Gram Staining, DNA extraction, RNA extraction, Plasmid Isolation, Cholesterol Determination Test, CRP Test, Blood Grouping, UV-Vis Spectroscopy

Software:LaTeX, MATLAB

Python 70%
R 65%
MatLab 70%
Bioinformatics Tools 80%
PyMOL 90%
Photoshop 95%



Sudeepto Saha

  • (+880) 01782535070


Bachelor of Science in Biochemistry and Biotechnology

CGPA: 3.88

Independent University, Bangladesh

(Completed 81 credits towards a degree)

Bachelor of Architecture

Spring, 2018 - Summer, 2020

North South University

(Completed 87.5 credits towards a degree)

Award & Honors

  • Vice Chancellor’s Honour List- Summer, 2021
  • Dean’s Honour List- Spring,2021
  • Dean’s List- Fall, 2020

Research Experience

Research Assistant

2021 - Present

Department of Physical Sciences, Independent University, Bangladesh

Supervised by DR. Khan M. B. Asad

  • Characterizing primary beams of radio astronomy antennas using astronomical observations and modern statistical techniques.

Research Internship

September,2021 - November,2021

Plant Biotechnology Lab, Dhaka University

Mentored by Dr. Zeba Islam Seraj

  • Effect of rhizospheric and endophytic bacteria on root architecture and gene expression for improved salt tolerance of rice.
  • RAPD assay of wild-type rice varity in Bangladesh.


Saha S., Araf, Y. Promon, S.K. Circulating tumor DNA in cancer diagnosis, monitoring, and prognosis. J Egypt National Cancer Institute 34, 8 (2022).


Here is some research projects I am involved:


I am developing some computational biology, Immunoinformatics and Genomics related course content

Vaccine Design

Immunoinformatics and Reverse Vaccinology techniques for designing epitope based vaccine

Functional Genomics

Perform RNA-Seq, ChIP-Seq, and DNA methylation data analyses, using open source software, including R and Bioconductor.

Bioinformatics Method

Dealing with databases,Performing Blast, multiple sequence alignments, phylogenetics, selection analysis , metagenomics,motif searching, protein-protein interactions, structural bioinformatics, gene expression data analysis, and cis-element predictions.



+880 9696736550